Clémence Sebe, Aurélie Névéol, Sarah Cohen-Boulakia, Alban Gaignard. Extraction d'informations sur les workflows scientifiques à partir de la littérature. 23ème conférence francophone sur l'Extraction et la Gestion des Connaissances (EGC), Jan 2023, Lyon, France. pp.313-320. ⟨hal-03991363⟩
Jérémy Guez, Guillaume Achaz, François Bienvenu, Jean Cury, Bruno Toupance, et al.. Understanding and inferring cultural transmission of reproductive success. Probabilistic Modeling in Genomics, Mar 2022, Oxford, United Kingdom. ⟨hal-04016758⟩
Arnaud Quelin, Jérémy Guez, Ferdinand Petit, Flora Jay, Frederic Austerlitz. Inference of the Cultural Transmission of Reproductive Success from human genomic data: ABC and machine learning methods. Junior Conference on DataScience and Engeneering 2022, Sep 2022, Palaiseau, France. ⟨hal-04011855⟩
Matthieu Barba, Raphaël Dutoit, Christianne Legrain, Bernard Labedan. Identifying reaction modules in metabolic pathways: bioinformatic deduction and experimental validation of a new putative route in purine catabolism. BMC Systems Biology, 2013, 7, pp.99. ⟨10.1186/1752-0509-7-99⟩. ⟨hal-01758866⟩
Loïc Paulevé, Courtney Chancellor, Maxime Folschette, Morgan Magnin, Olivier Roux. Analyzing Large Network Dynamics with Process Hitting. Luis Fariñas del Cerro; Katsumi Inoue. Logical Modeling of Biological Systems, Wiley, pp.125 - 166, 2014, 978-1-84821-680-8. ⟨hal-01060490⟩
Frédérique Bassino, Mathilde Bouvel, Adeline Pierrot, Dominique Rossin. An algorithm for deciding the finiteness of the number of simple permutations in permutation classes. Advances in Applied Mathematics, 2015, 64, pp.124 - 200. ⟨10.1016/j.aam.2014.12.001⟩. ⟨hal-01818308⟩
Lukas Studer, Loïc Paulevé, Christoph Zechner, Matthias Reumann, Maria Rodriguez Martinez, et al.. Marginalized Continuous Time Bayesian Networks for Network Reconstruction from Incomplete Observations. AAAI Conference on Artificial Intelligence, Feb 2016, Phoenix, Arizona, United States. ⟨hal-01305967⟩
Morterol Martin, Philippe Dague, Sabine Pérès, Laurent Simon. Minimality of Metabolic Flux Modes under Boolean Regulation Constraints. 12th International Workshop on Constraint-Based Methods for Bioinformatics WCB’16, Sep 2016, Toulouse, France. ⟨hal-01483433⟩
Lirong Huang, Loïc Paulevé, Christoph Zechner, Michael Unger, Anders S. Hansen, et al.. Reconstructing dynamic molecular states from single-cell time series. Journal of the Royal Society Interface, 2016, 13 (122), ⟨10.1098/rsif.2016.0533⟩. ⟨hal-01362502⟩
Juraj Kolčák, David Šafránek, Stefan Haar, Loïc Paulevé. Unfolding of Parametric Boolean Networks. 7th International Workshop on Static Analysis and Systems Biology (SASB 2016), Sep 2016, Edimbourg, United Kingdom. pp.67-90, ⟨10.1016/j.entcs.2018.03.009⟩. ⟨hal-01354109v2⟩